Gordon K Springer, U. Missouri Daniel Berleant, U. A. at Little Rock MCBIOS 2008 Oklahoma City, OK February 24, 2008
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1 Electronic Collaborations and the Great Plains Network Gordon K Springer, U. Missouri Daniel Berleant, U. A. at Little Rock MCBIOS 2008 Oklahoma City, OK February 24, 2008
2 Outline GPN Brief History, Mission & Goals Middleware Collaboration Activities Current Activities Future 2
3 Consortium Cooperation BITNET MIDnet Great Plains Network courtesy of Jerry Niebaum 3
4 The GPN Network 4
5 GPN Today 5
6 Membership Arkansas State University Kansas State University North Dakota State University Oklahoma State University South Dakota School of Mines & Technology South Dakota State University University of Arkansas University of Arkansas at Little Rock University of Arkansas for Medical Sciences University of Kansas University of Missouri - Columbia University of Missouri - KC Missouri University of Science & Technology (formerly UMR) University of Missouri - SL University of Nebraska - Lincoln University of North Dakota University of Oklahoma University of Oklahoma Health Sciences Center University of South Dakota University of Tulsa Wichita State University Iowa State University University of Minnesota Ciena, Fujitsu, Adva 6
7 Great Plains Network is A consortium A community of researchers and educators connected by a high-speed network 14% of the United States 25% of NSF EPSCoR States About 10% of Internet2 Member Institutions 7
8 Mission Enhance competitiveness and economic benefit by providing leadership in advanced high performance applications and network technologies to enable the Great Plains region to lead in innovative learning/educational environments and collaborative research. 8
9 Leadership Goals for 2008 Broaden participation in GPN research initiatives Increase SHARED access to GPN member resources: Computing, Data storage, Other; Provide useful, consistent communication to members and interested parties through various mediums & activities Provide support on emerging technologies. 9
10 GPN Collaborative Framework 10
11 Middleware Collaboration Activities Extending the Reach Educause/NSF NMI-EDIT (authentication across the region) Grid Computing Globus, OSG, etc Collaboration & resource sharing in Virtual Organizations (e.g., GPNGrid, BioSci) 11
12 GPN Projects Bioinformatics Gordon Springer & Dan Berleant Collaborative Middleware Environment Amy Apon GPNgrid David Swanson Human Language Technology Bill Hsu 12
13 Administrative User Identity Provider Identity Directory Handle Service Attribute Authority 4 Credentials 5 Credentials Handle WAYF Handle YES/NO Service Provider SHIRE Handle SHAR Command Resource Manager Attributes Reso urce Using Middleware Tools for VO Collaboration VO Entitlement Command Entitlement Server Entitlement Client App 2/24/ Entitlement Server ES DB Command YES/NO 11
14 User Simplified Design 1: request by URL Identity Provider 2 3 Entitlement Server 5 4 Service Provider TCP/IP uses public key encryption for authentication and privacy Page 2/24/
15 Getting Authenticated 2/24/
16 Entering the VO Environment 2/24/
17 A menu of Services 2/24/
18 When Peter asks for Biotools he is refused: Not Everyone is Authorized
19 Bioinformatics Tools 2/24/
20 What s s Next? What needs do you have that could be aided by this collaborative environment? An open invitation to all MCBIOS members Bring your ideas Join the discussion Let us link to your tools 20
21 Why Mine Biological Texts? Objective: Harvest the biomedical literaturome This adds value to existing knowledge Impact: Enhanced ability of existing knowledge including your work! to contribute to scientific progress Let s s look at some text mining tools now 21
22 Written by Jing Ding, Ph.D. 22
23 23
24 24
25 25
26 Written by Michael Bauer 26
27 27
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29 29 Written by Jing Ding, Ph.D.
30 30
31 MetNet Interaction Discoverer, Screen 1 Written by Lifeng Zhang, Jing Ding, Ph.D., and Tuan Cao 31
32 MetNet Interaction Discoverer, Screen 2 32
33 MetNet Interaction Discoverer, Output 33
34 FOR MORE INFO... Where to get tools Go to Follow the links to the GPN Wiki and the bioinformatics group page Contacts: 34
35 Questions? 35
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TABLE 3c: Congressional Districts with Number and Percent of Hispanics* Living in Hard-to-Count (HTC) Census Tracts**
living Alaska 00 47,808 21,213 44.4 Alabama 01 20,661 3,288 15.9 Alabama 02 23,949 6,614 27.6 Alabama 03 20,225 3,247 16.1 Alabama 04 41,412 7,933 19.2 Alabama 05 34,388 11,863 34.5 Alabama 06 34,849 4,074
TABLE 3b: Congressional Districts Ranked by Percent of Hispanics* Living in Hard-to- Count (HTC) Census Tracts**
Rank State District Count (HTC) 1 New York 05 150,499 141,567 94.1 2 New York 08 133,453 109,629 82.1 3 Massachusetts 07 158,518 120,827 76.2 4 Michigan 13 47,921 36,145 75.4 5 Illinois 04 508,677 379,527
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3/17 TABLE 4-401 FULL-TIME EQUIVALENT ENROLLMENT FALL 2006-2016 Lawrence State* Wichita State Emporia State Fort Hays State Pittsburg State Total 2006 23,942 19,784 10,549 5,224 6,156 6,371 72,026 2007
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Unemployment Rate (%) Rank State. Unemployment
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Unemployment Rate (%) Rank State. Unemployment
States Ranked by November 2015 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 North Dakota 2.7 19 Indiana 4.4 37 Georgia 5.6 2 Nebraska 2.9 20 Ohio 4.5 37 Tennessee 5.6
Unemployment Rate (%) Rank State. Unemployment
States Ranked by April 2017 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 Colorado 2.3 17 Virginia 3.8 37 California 4.8 2 Hawaii 2.7 20 Massachusetts 3.9 37 West Virginia
Unemployment Rate (%) Rank State. Unemployment
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Unemployment Rate (%) Rank State. Unemployment
States Ranked by March 2016 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 South Dakota 2.5 19 Delaware 4.4 37 Georgia 5.5 2 New Hampshire 2.6 19 Massachusetts 4.4 37 North
Unemployment Rate (%) Rank State. Unemployment
States Ranked by September 2017 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 North Dakota 2.4 17 Indiana 3.8 36 New Jersey 4.7 2 Colorado 2.5 17 Kansas 3.8 38 Pennsylvania
Unemployment Rate (%) Rank State. Unemployment
States Ranked by December 2017 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 Hawaii 2.0 16 South Dakota 3.5 37 Connecticut 4.6 2 New Hampshire 2.6 20 Arkansas 3.7 37 Delaware
Unemployment Rate (%) Rank State. Unemployment
States Ranked by September 2015 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 North Dakota 2.8 17 Oklahoma 4.4 37 South Carolina 5.7 2 Nebraska 2.9 20 Indiana 4.5 37 Tennessee
Unemployment Rate (%) Rank State. Unemployment
States Ranked by November 2014 Unemployment Rate Seasonally Adjusted Unemployment Unemployment Unemployment 1 North Dakota 2.7 19 Pennsylvania 5.1 35 New Mexico 6.4 2 Nebraska 3.1 20 Wisconsin 5.2 38 Connecticut
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